accessible_DNA_region [SO_0002331]
A region of DNA that is depleted of nucleosomes and accessible to DNA-binding proteins including transcription factors and nucleases. Added as part of GREEKC terms. See GitHub Issues #531 & #534.
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen accessible_DNA_region in VFB
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/SO_0002331",
"symbol": "",
"types": [
"Entity",
"Class"
],
"short_form": "SO_0002331",
"label": "accessible_DNA_region"
},
"description": [
"A region of DNA that is depleted of nucleosomes and accessible to DNA-binding proteins including transcription factors and nucleases."
],
"comment": [
"Added as part of GREEKC terms. See GitHub Issues #531 & #534."
]
},
"query": "Get JSON for Class",
"version": "44725ae",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/SO_0001411",
"types": [
"Entity",
"Class"
],
"short_form": "SO_0001411",
"label": "biological_region"
}
],
"relationships": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0002131",
"label": "overlaps",
"type": "overlaps"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/SO_0001720",
"types": [
"Entity",
"Class"
],
"short_form": "SO_0001720",
"label": "epigenetically_modified_region"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [
{
"synonym": {
"scope": "has_exact_synonym",
"label": "accessible DNA region",
"type": ""
},
"pub": {
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
"Entity",
"Individual",
"pub"
],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
}
],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
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"pub"
],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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