complex_transcript_variant [SO_0001577]

A transcript variant with a complex INDEL- Insertion or deletion that spans an exon/intron border or a coding sequence/UTR border.

complex_transcript_variant

ID: SO_0001577

Class

A transcript variant with a complex INDEL- Insertion or deletion that spans an exon/intron border or a coding sequence/UTR border.

EBI term: Complex InDel - Insertion or deletion that spans an exon/intron border or a coding sequence/UTR border.

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Classification

transcript_variant

Alternative Names

Synonym	Scope	Reference
Seattleseq:codingComplex	related synonym	VAR
complex change in transcript	exact synonym
complex_indel	exact synonym	//ensembl.org/info/docs/variation/index.html
complex transcript variant	exact synonym
Seattleseq:codingComplex-near-splice	related synonym	VAR

References

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="color:#f1fa8c">"http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "complex change in transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_related_synonym", "label": "Seattleseq:codingComplex", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_related_synonym", "label": "Seattleseq:codingComplex-near-splice", "type": "http://purl.obolibrary.org/obo/so#VAR" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } } ], "def_pubs": [] }

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