intergenic_variant SO_0001628
intergenic_variant
ID: SO_0001628
Class
A sequence variant located in the intergenic region, between genes.
EBI term Intergenic variations - More than 5 kb either upstream or downstream of a transcript.
Open in VFB 3D Browser →Classification
Alternative Names
| Synonym | Scope | Reference |
|---|---|---|
| ANNOVAR:intergenic | related synonym | //www.openbioinformatics.org/annovar/annovar_download.html, VAR |
| VEP:intergenic_variant | exact synonym | VAR |
| intergenic | exact synonym | //ensembl.org/info/docs/variation/index.html |
| Jannovar:intergenic_variant | exact synonym | //doc-openbio.readthedocs.org/projects/jannovar/en/master/var_effects.html |
| snpEff:INTERGENIC | exact synonym | VAR |
| intergenic variant | exact synonym | |
| Seattleseq:intergenic | exact synonym | VAR |