stop_lost SO_0001578
stop_lost
ID: SO_0001578
Class
A sequence variant where at least one base of the terminator codon (stop) is changed, resulting in an elongated transcript.
EBI term: Stop lost - In coding sequence, resulting in the loss of a stop codon.
Open in VFB 3D Browser →Classification
Alternative Names
| Synonym | Scope | Reference |
|---|---|---|
| Seattleseq:stop-lost | exact synonym | VAR |
| VAT:removedStop | exact synonym | VAR |
| ANNOVAR:stoploss | exact synonym | //www.openbioinformatics.org/annovar/annovar_download.html |
| stop lost | exact synonym | //ensembl.org/info/docs/variation/index.html |
| Jannovar:stop_lost | exact synonym | //doc-openbio.readthedocs.org/projects/jannovar/en/master/var_effects.html |
| snpEff:STOP_LOST | exact synonym | VAR |
| stop codon lost | exact synonym | |
| VEP:stop_lost | exact synonym | VAR |
| VAAST:stop_lost | exact synonym | VAR |
| Seattleseq:stop-lost-near-splice | related synonym | VAR |