VFB Content Report
VFB Content Report 2024-10-21
Report of content found at http://pdb.virtualflybrain.org
on Mon, 21 Oct 2024 00:56:10
Ontology Content
Anatomy | Classes | Publications |
---|---|---|
All Terms | 24421 | 1647 |
All Nervous System Parts | 17924 | 1155 |
All Neurons | 14247 | 860 |
Characterised Neurons | 6603 | 859 |
Provisional Neurons | 7644 | 13 |
All Nervous System Regions | 1438 | 254 |
Synaptic Neuropils | 635 | 144 |
Neuron Projection Bundles | 593 | 129 |
Cell Body Rinds | 132 | 8 |
Sense Organs | 861 | 163 |
127057 formal assertions, of which 52635 are SubClassOf assertions and 74422 are other relationship types
113291 formal assertions on nervous system components, of which 44609 are SubClassOf assertions and 68682 are other relationship types
Image Content
(excludes hemibrain v1.0.1)
156790 total images from 109 datasets
78709 single neuron images of 5968 cell types
43699 images of expression patterns of 16879 drivers
2738 images of expression patterns of 579 split combinations
50803 images of expression pattern fragments of 4792 drivers
Annotations
338162 annotations recording 4159 types of anatomical structure that 17948 specific driver lines are expressed in.
273811 annotations recording 3056 parts of the nervous system that 15243 specific driver lines are expressed in.
46850 annotations recording 2026 types of neuron that 5402 specific driver lines are expressed in.
9802 annotations recording 793 types of neuron that 1901 specific split combinations are expressed in.
Connectivity
Neuron | Number of Neurons | Input/Output Entity | Number of Entities | Connections |
---|---|---|---|---|
Any neuron (individuals) | 30777 | Any neuron (individuals) | 30777 | 3499052 |
Any neuron (individuals) | 22585 | Region (individuals) | 218 | 299683 |
Any neuron (classes) | 324 | Muscle (classes) | 227 | 248 |
Any neuron (classes) | 770 | Sense organ (classes) | 433 | 535 |
Content by Template
(excludes hemibrain v1.0.1)
Template Name | Datasets | Images | Single Neurons | EM Neurons | Full Expression Patterns | Split Expression Patterns | Partial Expression Patterns | Painted domains |
---|---|---|---|---|---|---|---|---|
Adult Head (McKellar2020) | 1 | 18 | 0 | 0 | 0 | 0 | 0 | 0 |
adult VNS template - Court2018 | 10 | 3209 | 1 | 0 | 3185 | 486 | 0 | 22 |
JRC_FlyEM_Hemibrain | 2 | 22701 | 22588 | 22587 | 0 | 0 | 0 | 114 |
JRC2018Unisex | 68 | 101021 | 45870 | 29074 | 32160 | 1633 | 38796 | 46 |
L1 larval CNS ssTEM - Cardona/Janelia | 24 | 5019 | 5019 | 5019 | 0 | 0 | 0 | 0 |
JRC2018UnisexVNC | 22 | 44363 | 25789 | 2029 | 8314 | 625 | 10240 | 23780 |
adult brain template Ito2014 | 1 | 75 | 1 | 0 | 0 | 0 | 0 | 75 |
L3 CNS template - Wood2018 | 3 | 2032 | 1412 | 0 | 0 | 0 | 1773 | 255 |
Adult T1 Leg (Kuan2020) | 2 | 678 | 464 | 0 | 0 | 0 | 0 | 4 |
adult brain template JFRC2 | 21 | 41940 | 16316 | 0 | 25272 | 600 | 16127 | 58 |
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